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Blinn College • Bryan • Natural Science • Biology - BIOL


Microbiology BIOL-2421

  • Spring 2013 Full Term 2013

  • Section SECTION_302 CRN-20825

  • 4 Credits

  • 01/14/2013 to 05/07/2013

  • Modified 01/10/2013



Meeting Times


MW 12:00pm – 1:15pm lecture; 1:25pm – 2:40pm laboratory

Contact Information


INSTRUCTOR: Dr. Elizabeth Sharpe-Aparicio

Office: S-112

 Office Hours: MW 10:45am-11:45am & TT 10:30-11:30am , or  by appointment.

 Tel:  209-7474

 email:  esharpe@blinn.edu

Description


An introduction to the study of bacteria and other microorganisms. Topics include fundamentals of microbiology, microbial control, microbiology in everyday life, infection and host resistance and pathogenic organisms. Laboratory is devoted to various culturing and staining techniques.

Requisites

Prerequisites: BIOL 1406 with a grade of "C" or better. CHEM 1407 is recommended.

Core Curriculum Statement


This is a Core Course in the 42-Hour Core Curriculum of Blinn College. As such, students will develop proficiency in the appropriate Intellectual Competencies, Exemplary Educational Objectives, and Perspectives.

Outcomes


1. Summarize a history of microbiology.

2. Describe the different types of cell and colony morphologies.

3. Interpret selected metabolic processes carried out by cells and their essential role in sustaining life.

4. Discuss the differences between a virus and a living organism.

5. Identify the etiologic agent responsible for the pathogenesis of various diseases and describe the symptoms of these diseases and the response by the human immune system.

6. Use various physical and chemical means for microbial control.

7. Demonstrate the proficiency in using oil immersion technique.

8. Analyze pure and mixed microbial specimens using determinative bacteriological techniques.

Materials


Textbook: Alcamo’s Fundamentals of Microbiology, 9th Edition, Pommervile, J.C. 2010, Jones and Bartlett Publishers.

Lab Manual: BIOL 2421 Microbiology Laboratory Manual, 1st Edition. McNeil, M., Sharpe-Aparicio, E. and Sharpe, V., Bluedoor, LLC, 2012.

 

Course Requirements


GENERAL: You are expected to read your book and keep up with the material day-by-day.  A&P2 is a very demanding and time consuming course so make sure you have a calendar to organize you day and help you to ensure you do not miss any assignments.

eCAMPUS

Access to the Internet is REQUIRED. Internet access at home would certainly be a plus, however, all students at Blinn College and/or Texas A&M have computing resources available to them. The Open Computer Labs at Blinn College are located in Rooms H-225 and L-258, and the Library. If you are not familiar with these, see me or inquire at the Learning Center in the Library Building, L-258, for more details, ASAP. eCampus is an online course tool. It is in essence a virtual classroom through which I will be posting course related materials and information. You will also be able to contact me with questions and or problems you might be having and have the ability to contact your classmates. It will be your responsibility to check this site regularly: https://ecampus.blinn.edu/default.asp

All lecture notes can be found on ecampus under the “Lessons” tab, in the “Lecture” folder and are organized by chapter.  Before coming into class, you are expected to print the notes so you will be able to concentrate on my lecture and take notes in addition to the bullets that are already on each slide.

LECTURE EXAMS:  There will be four exams worth 100 points each (closed book, no notes, no electronic equipment, cell phones must be TURNED OFF)  that may be a combination of short answer, fill-in-the-blank, multiple choice, identification, and short essay.  Makeup exams will be given at the discretion of the instructor.  Makeup tests are of a different format and contain different questions than the tests given at the scheduled times.  . After exams are graded, grades will be posted on ecampus.  During the first lecture period following the exam, exam scantrons will be returned to the student for an in class review of the exam with the professor.  Neither questions nor answers may be copied or photographed.  You may come to my office during my office hours and review exams.  A comprehensive, multiple-choice lecture final (worth 200 points) will be given at the end of the semester. The questions on the final will be: 60% from the lecture material covered on lecture exams1-4, 25% on viruses, and15% from the laboratory material. 

 

LAB EXAMS:  Three 50-point lab exams are scheduled throughout the semester.  The exams will cover material previously covered in lab and will be fill-in-the blank questions, short answer, true or false, and/or labeling.  I do not give makeup lab exams.

 

 

LAB ACTIVITIES: Before coming into lab, the student should refer to the Laboratory Schedule handout and read the laboratory modules to be performed in lab that day.  This will help the student to more efficiently budget your time.  Each day in lab all students will be completing lab activities and these same lab activities should be studied before coming into the next lab period.  As soon as we meet for the next lab period, the student will turn in the completed lab activity and a lab quiz over this same material will be given.  Turned in lab activities must be completely filled in and answers must be in complete sentences or the assignment will be graded as a zero.   I will grade the entire lab quiz and selected portions of the lab activity and will total the points from both for one grade.  I will not take late labs unless you have an excused absence as defined by Blinn College Policy.  The grades on the lab activities/quizzes are averaged and will be worth 100 points.

 

UNKNOWNS:  There will be 3 unknowns assigned during the semester.  Unknowns 1 is worth 25 points, unknown 2 is worth 25 points each and unknown 3 is worth 100 points.  For unknowns #1&2, the student will learn the necessary means to determine the genus and species of each unknown.  The student will be responsible for inoculation of biochemical media with the given unknown bacteria, any necessary staining procedures, recording daily activities and cultural characteristics and the eventual identification (genus and species name) of each bacterium.

All student s will be required to photograph their organism in the microscope, biochemical test results and each individual will be responsible for turning in the clear, properly-exposed pictures with the unknown lab report; failure to submit photographs will result in a 20 point deduction from the final report grade.  Post due date, late unknown reports will lose 2 points per day.  More information on the unknown projects can be found in the Laboratory Manual or contacting the professor.

You may need to return to the lab for additional time periods (outside of the scheduled lab times) in order to complete the tests necessary for identification of your unknowns.  Budget your time accordingly to meet assignment deadlines.

SCIENCE BUILDING HOURS: Monday – Thursday:               8:00 a.m. to 8:00 p.m.

            Friday:                                     8:00 a.m. to 12 noon

            Saturday and Sunday:            Closed

Evaluation


Possible points per assignment

Total per assignment

Your points earned

4 lecture exams @100 points each

400

 

3 Lab exams @50 pts each

150

 

Lab Activities/quizzes

100

 

Unknowns 1 @25 pts

  25

 

Unknowns 2 @25 pts

  25

 

Unknowns 3

100

 

Comprehensive final

200

 

Total

 

 

 Your final grade may be calculated by taking the sum of your earned points (your grades).

900+      A                    700-799  C                  590 and below   F      

800-899  B                  600-699  D

I do not round up grades at the end of the semester.

Blinn College Policies


Blinn College policies on civility, class attendance; scholastic integrity; students with disabilities; final grade appeals; and electronic devices as stated in the Blinn College Student Handbook, Faculty Handbook, Blinn College Catalog and specific technical program handbooks. All policies, guidelines and procedures in the Student and Faculty Handbook and the Board and Administrative Policy Manuals are applicable to this course

Civility Statement

Members of the Blinn College community, which includes faculty, staff and students, are expected to act honestly and responsibly in all aspects of campus life. Blinn College holds all members accountable for their actions and words. Therefore, all members should commit themselves to behave in a manner that recognizes personal respect and demonstrates concern for the personal dignity, rights, and freedoms of every member of the College community, including respect for College property and the physical and intellectual property of others.

      Civility Notification Statement. If a student is asked to leave the classroom because of uncivil behavior, the student may not return to that class until he or she arranges a conference with the instructor; it is the student’s responsibility to arrange for this conference. 

      This statement reflects step one in a possible four step process.  The Incivility Protocol is detailed in the Blinn College Student Handbook, www.blinn.edu/student%20handbook.pdf.

Attendance Policy

The College District believes that class attendance is essential for student success; therefore, students are required to promptly and regularly attend all their classes. A record of attendance will be maintained from the first day of classes and/or the first day the student’s name appears on the roster through final examinations. If a student has one week’s worth of unexcused absences during the semester, he or she will be sent an e-mail by the College District requiring the student to contact his or her instructor and schedule a conference immediately to discuss his/her attendance issues. Should the student accumulate two weeks’ worth of unexcused absences, he or she will be administratively withdrawn from class.

There are four forms of excused absences recognized by the institution:

  1. observance of religious holy days—The student should notify his or her instructor(s) not later than the 15th day of the semester concerning the specific date(s) that the student will be absent for any religious holy day(s);
  2. representing the College District at an official institutional function;
  3. high school dual credit students representing the independent school district at an official institutional function; and
  4. military service.

Other absences may be considered excused at the discretion of the faculty

member with appropriate documentation.  A student enrolled in a developmental course is subject to College District-mandated attendance policies. Failure to attend developmental classes shall result in removal from the course as defined by the College District.

It is the student’s responsibility to officially drop a class he or she is no longer attending.  To officially drop a class the student must obtain the class withdrawal form from Enrollment Services, complete the class withdrawal form, secure the required signatures, and return the completed form to Enrollment Services. The last day to drop with a Q is according to the Academic Calendar.

Scholastic Integrity

Blinn College does not tolerate cheating, plagiarism, or any other act of dishonesty with regard to the course in which you are enrolled.  The following text defines the faculty member’s responsibility with regard to the scholastic integrity expectation for this and all courses at Blinn College.

It is the responsibility of faculty members to maintain scholastic integrity at the College District by refusing to tolerate any form of scholastic dishonesty.  Adequate control of test materials, strict supervision during testing, and other preventive measures should be utilized, as necessary, to prevent cheating or plagiarism.  If there is compelling evidence that a student is involved in cheating or plagiarism, the instructor should assume responsibility and address the infraction.  Likewise, any student accused of scholastic dishonesty is entitled to due process as outlined in Blinn College Board Policy FLB (Local).  The Scholastic Integrity Policy is located in the Blinn College Student Handbook, www.blinn.edu/student%20handbook.pdf.  In a case of scholastic dishonesty, it is critical that written documentation be maintained at each level throughout the process.

Students with Disabilities

Blinn College is dedicated to providing the least restrictive learning environment for all students. Support services for students with documented disabilities are provided on an individual basis, upon request. Requests for services should be made directly to the Office of Special Populations serving the campus of your choice.  For the Bryan campus, the Office of Special Populations (Administration Building) can be reached at (979)209-7251.  The Brenham, Sealy and Schulenburg campuses are served by the Office of Special Populations on the Brenham campus (Administration Building Room 104) and can be reached at (979)830-4157.  Additional information can be found at www.blinn.edu/disability/index.html.

Final Grade Appeal

If a student wishes to appeal a final grade in a course, Blinn College Board Policy FLDB (Local), Course Grade Complaints, outlines the timeline for the appeal and the four steps in the appeal.  This policy is located in the Blinn College Student Handbook, www.blinn.edu/student%20handbook.pdf.

Electronic Devices

All the functions of all personal electronic devices designed for communication and/or entertainment (cell phones, pagers, beepers, iPods, and similar devices) must be turned off and kept out of sight in all College District classrooms and associated laboratories.  Any noncompliance with this policy shall be addressed in accordance with the College District civility policy (administrative policy).  This information is contained in Blinn College Board Policy FLB (Local).

Course Policies


PROBLEM RESUOLUTION: If you have a complaint about your class, you should first request a conference with your instructor to try and resolve the problems or issues. If the problems or issues cannot be resolved at the instructor level, you should request a conference with the Division Chair, Mr. Dwight Bohlmeyer, Science 241, dbohlmeyer@blinn.edu.

Schedule


Date

Lecture Chapter /Topic

Laboratory Activity/ Topic

1/14-16

Ch 1 Intro/History of Microbiology

Lab 1 General Lab Safety, equipment & supplies

Lab 2 Lab Equipment, Media;

1/16-23

Ch  3 Concept & Tools for Studying Microbiology

Lab 3 Ubiquity of Bacteria

Lab 10 Microscopy

1/28

Ch 4 Cell Structure and Function

Lab 4 Aseptic Technique

Lab 14 Cell Morphology & Cell Structures

1/30

Ch 5 Bacterial Reproduction & Growth

Lab 5 Streak Plate Method

Lab 15 Growth Requirements of Bacteria as Homework

2/4

Ch 6 Bacterial Metabolism

Lab 6-7 Quantification Pour Plate Technique

Lab 7 Colony Characteristics

2/6

Catch up on Lecture

Complete Lab 6

Lab 11 Intro to Smear Preparation & Simple Staining

2/11

Lecture Exam I

Lab 12 &13 Gram, Negative, & Capsular Staining

2/13

Ch7 Control of Microorganisms

Chapter 24 (Pomerville) Antimicrobial Drugs

2/18

Ch 24 Continued

Lab 8  Chemical Control

2/20

Ch 8 Bacterial Genetics

Complete Lab 8

Ch9 (Pomerville) Gene Transfer, Genetic Engineering

2/25

Ch9 Continued

Lab Exam Review

2/27

Ch19 Infection & Disease

LAB EXAM 1

3/4

Lecture Exam 2

Handout Unknown #1: Gram +.  Lab 16, 23-25 Catalase, PRBroth, Nitrate Reduction, Motility & work of unknown #1

3/6

Ch20 Resistance & Innate Immunity

Lab 18-20 MSA, Coagulase, BA, Bile Esculin, Optochin, Bacitracin & work of unknown #1

3/11-15

Spring Break!!

3/18

Ch 21 Resistance & Acquired Immunity Ch22.1 Immunity to Disease

Differential WBC ecampus handout

Finish work on unknown #1: Flow chart & lab report requirements

Handout Unknown #2. 

3/20

Ch10 Airborne Diseases

Lab 26-30 Oxidase,MAC, TSIA& work on unknown #2

3/25

Ch10 Continued

Unknown #1 Lab Report Due

Lab 29-30 IMViC & Urea Agar & work on unknown #2

3/27

Ch11 Foodborne & Waterborne Diseases  

Finish work on unknown #2

Hand out final bacterial unknown review Lab 31

4/1

Lecture Exam 3

Work on final unknown

4/3

Ch12 Soilborne & Arthropodborne Diseases

Unknown #2 Lab Report Due.

Lab Exam 2:

4/8

Ch13 Sexually Transmitted, Contact Bacterial Diseases

Work on final unknown

4/10

Ch17 Eukaryotic Microorganisms: The Fungi

Work on final unknown

 

4/15

Ch18 Eukaryotic Microorganisms: The Helminths

 

Unknown #3 Lab Report Due

Lab 32 Eukaryote Taxonomy as Homework

Lab 34 The Fungal Parasites

4/17

Ch18 Eukaryotic Microorganisms: The Helminths

Lab 35 The Protozoan Parasites

4/20

Catch up on Lecture

Lab 36 The Helminthic Parasites

Review Fungal and Protozoan parasites

4/24

Lecture Exam 4

Lab Exam 3

4/29

Ch14 Viruses, Tumors & Prions Ch 23.4 HIV-AIDS

Ch 15 Viral Respiratory & Skin Diseases

 

5/1

Ch16 Viral Blood, lymphatic, GI, & Nervous Sys Diseases

Finish Lecture of viruses

5/6

Comprehensive Final Exam: Rm S210

Monday, 5/6, 12:45pm-2:45pm